gwplot is a plotting library for genomics data and a Python interface to GW, a high-performance interactive genome browser.
Visit the documentation for more details
pip install gwplot
from gwplot import Gw
# Initialise with reference genome
gw = Gw("reference.fa")
# Add data sources
gw.add_bam("sample.bam")
gw.add_track("variants.vcf")
# Set region to view
gw.add_region("chr1", 1000000, 1100000)
# Render and save
gw.save_png("output.png")
Contributions are welcome! Please feel free to submit a Pull Request.
MIT License